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Educational Omics Framework

教育組學框架 · The Uedu Educational Omics Research Stack

A research framework that treats learning as a multi-dimensional dynamic system — fixed as a three-layer stack of theory, method / infrastructure, and platform / testbed.

What is Educational Omics?

Inspired by the "-omics" paradigm in biomedical sciences (genomics, proteomics, metabolomics), Educational Omics treats learning as a multi-dimensional dynamic system rather than a single score, click stream, or correctness rate.

Educational Omics is the theory, the Educational Omics Data Lake is the methodological infrastructure, and Uedu is the living platform through which the theory and methods are operationalized in real educational settings. Educational Omics 是理論框架,Educational Omics Data Lake 是方法與資料基礎設施,Uedu 則是真實教育場域中持續運作的研究平台,負責將六維度學習資料轉化為可分析、可回饋、可驗證的教學與研究證據。

Together, the three layers form an educational data infrastructure — accumulating data over time, supporting cross-course and cross-institution research, and operating with de-identification, API / MCP maintenance, and AI compute as standing capabilities (see Uedu Labs). MMLA is the inherited method family providing multimodal data collection and analysis; Educational Omics organizes those methods around six theoretically motivated dimensions; Uedu is the living research testbed that runs the whole stack in classrooms.

For a comprehensive technical description with platform implementation details, see the full framework page on Uedu.

The Uedu Educational Omics Research Stack

Theory · Method / Infrastructure · Platform / Testbed — three layers, one accumulating research lineage

Uedu Educational Omics Research Stack — three layers (Theory / Method / Platform) with the Environomics vertical slice
Figure · The Uedu Educational Omics Research Stack — Layer 1 (Educational Omics Framework with six dimensions), Layer 2 (Educational Omics Data Lake — acquisition, integration & synchronization, storage, analytics & modeling, application & feedback), and Layer 3 (Uedu as the living research platform with Uedu Core / Fit / Sense / Forums). The right-side column shows Environomics as a vertical slice across the three layers. 三層架構與 Environomics 垂直切面示意圖。
Layer 1 · 理論
Theory / Educational Omics Framework

Naming and theorization. Educational Omics organizes learning into six theoretically motivated dimensions — cognitive, linguistic, physiological/neural, social, environmental, ethical — treating learning as a multi-dimensional dynamic system rather than a single score, click stream, or correctness rate.

這一層的核心貢獻是命名與理論化:把學習組織為認知、語言、生理/神經、社交、環境、倫理六個理論性維度,建立可被學界引用、延伸與檢驗的研究框架。

Canonical anchor: Chang & Li, ICMET 2025 — first paper to name the Educational Omics framework.
Layer 2 · 方法/基礎設施
Method / Infrastructure / Educational Omics Data Lake

Not a single method but a growing method family. The data lake architecture — acquisition, integration & synchronization, storage, analytics & modeling, application & feedback — extends MMLA with shared schemas, validated algorithms, and explainable models across the six dimensions.

這一層是逐步長出的方法家族:資料湖負責蒐集、同步、保存、分析與回饋;後續論文(PALM、C-GRASP、knowledge graph、temporal lag、digital twin 等)皆作為六維度或跨組學的方法實作模組逐步加入。

Anchor: Chang & Li, ICMET 2025 (data lake as method-side infrastructure). Extending modules — PALM, C-GRASP, knowledge graph, temporal-lag, digital twin — see Publications and uedu.tw/practice.
Layer 3 · 平台/場域
Platform / Testbed / Uedu as the living system

Not a paper but a living research testbed. Uedu and its subsystems run in real classrooms — AI dialogue, learning activities, surveys and assessments, classroom events, physiological streams, a data lake, and research ethics workflows — accumulating data across courses and institutions over time.

這一層的代表不是論文,而是 Uedu 持續運作的真實系統與教學現場資料;不應被描述為產品或網站,而是 living research testbed 與 operational research infrastructure。

Live system: uedu.tw · subsystems Uedu Core / Fit / Sense / Forums / Mind / Brain · Uedu Labs (data lake, de-identification, API / MCP, AI compute) · uedu.tw/practice as the evidence registry mapping platform features to peer-reviewed research.
Bridge between Layer 1 and Layer 2

ICMET 2025 bridges theory and method: it names the Educational Omics framework (Layer 1) and proposes its data-lake instantiation (Layer 2) in the same paper. Subsequent method papers therefore do not redefine the framework — they implement specific omics dimensions or cross-omics fusions inside it, letting the research lineage accumulate rather than fragment.

ICMET 2025 同時命名 Educational Omics 理論並提出其資料湖實作,是 Layer 1 與 Layer 2 的橋接論文。後續方法論文不必重新定義整個框架,而是作為 Educational Omics Data Lake 中某個維度或跨組學的方法實作,使系列研究可以累積而非分散。

Vertical slice principle

Each new omics dimension is designed as a vertical slice traversing all three layers — theory definition (Layer 1) + method contribution (Layer 2) + platform carrier (Layer 3) — rather than as a separate branch. Environomics, for example, is reframed as the learning exposome (Layer 1), instrumented through IoT environmental sensing, temporal synchronization, and seat-level exposure modeling (Layer 2), and carried by Uedu Sense in real classrooms (Layer 3).

每一個新的組學維度都應設計為貫穿三層的 vertical slice:理論定義(Layer 1)+方法貢獻(Layer 2)+平台載體(Layer 3),而不是另開分支。例如 Environomics 升級為 learning exposome(Layer 1),由 IoT 環境感測、時間同步、seat-level exposure 建模實作(Layer 2),並由 Uedu Sense 在真實課堂中承載(Layer 3)。

Six Dimensions

Each dimension captures a distinct facet of the learning experience

認知組學
Cognomics

Cognitive processes traced through AI dialogue, Bloom's Taxonomy assessment, and learning trajectory analysis.

透過 AI 對話軌跡、Bloom 認知層次評估與學習軌跡分析,追蹤認知歷程。

LLM dialogues, UCG cognitive tests, learning trajectories
生理神經組學
PhysioNeuromics

Physiological and neural time-series — beat-to-beat intervals, heart rate variability, sleep, EEG, fNIRS — analyzed as correlates of learning states with validated, transparent algorithms.

生理與神經時間序列——BBI、心率變異度、睡眠、EEG、fNIRS——透過具驗證程序與可解釋演算法分析其與學習狀態的關聯。

Garmin wearables (multi-participant BBI), EEG headbands, fNIRS, PPG sensors
Raw signals only. The lab reports autonomic indicators (HRV-derived stress index, sleep, activity load); affective categories (happiness, anger, valence) are not asserted from BBI / HRV without a validated pipeline. This separation aligns with EU AI Act Recital 18, which distinguishes physical states from emotion recognition. 心率變異衍生的自律神經指標屬於生理層面;情感類別則不從 BBI/HRV 直接推論,與 EU AI Act Recital 18 的 physical state vs emotion recognition 區分一致。
社會組學
Sociomics

Social interaction patterns including discussion engagement, collaborative learning, and peer assessment.

社會互動模式,包含討論區參與、協作學習與同儕評量。

Forum posts, collaborative editor, peer reviews
環境組學
Environomics

The learning exposome — the totality of environmental exposures and contextual conditions a learner experiences during a learning event — across four sub-layers: indoor environmental quality (light, temperature, humidity, noise, CO₂, air), spatial and equipment conditions, temporal and activity context, and external environmental context.

學習暴露組(learning exposome)——學習者在學習事件中所承受的環境暴露與情境條件總和——含四個子層次:室內環境品質(光照、溫濕度、噪音、CO₂、空氣品質)、空間與設備條件、時間與活動情境、外部環境脈絡。

IoT sensors, IP cameras, STDB platform; spatial / temporal / external context metadata
語言組學
Linguomics

Language expression analysis — complexity, semantic structure, voice features — from speech and text.

語言表達分析——語言複雜度、語意結構、語音特徵——來自語音與文本。

Speech recordings, bilingual subtitles, text analysis
倫理組學
Ethicomics

Ethical governance — IRB approval, informed consent, privacy protection, AI bias detection.

倫理治理——IRB 審查、知情同意、隱私保護、AI 偏誤檢測。

NTU-REC IRB (202507EM058), consent management

Research Pipeline

From multimodal sensing to personalized learning

1
Multimodal Sensing

HRV, EEG, fNIRS, speech, interactions, IoT

2
Omics Analysis

Six-dimension framework analysis of learning

3
AI Integration

Uedu platform integration, contextual support

4
Adaptive Intervention

PALM model real-time adaptive scaffolding

5
Personalized Learning

Learner-centered massive personalization

Platform Implementation

Each dimension maps to a subsystem on the Uedu platform